* Genetic inheritance: Darwin did not understand the mechanism of inheritance. He knew that traits were passed down from parents to offspring, but he didn't know how. This was later explained by Gregor Mendel's work on genetics.
* DNA as the carrier of genetic information: Darwin was unaware of the existence of DNA. The discovery of DNA as the molecule responsible for carrying genetic information came much later.
* Mutations as the source of variation: Darwin recognized that variations existed within populations, but he didn't understand how those variations arose. Mutations, which are changes in the DNA sequence, are now understood to be the primary source of new variations.
* Punctuated equilibrium: This theory, proposed by Stephen Jay Gould and Niles Eldredge, suggests that evolution happens in bursts of rapid change interspersed with long periods of stability. Darwin's theory, on the other hand, emphasized gradual change over time.
It's important to remember that Darwin's theory was based on the knowledge available in his time. As science has progressed, our understanding of evolution has become more sophisticated, incorporating new principles and expanding on Darwin's original ideas.