More general terms:
* Complex cells (emphasizes the structural complexity)
* Nucleated cells (refers to the presence of a nucleus)
* Organisms with nuclei (focuses on the nuclear feature)
More specific terms:
* Protista (if referring specifically to eukaryotic organisms that are not plants, animals, or fungi)
* Eukarya (the domain of life that includes all eukaryotes)
The best synonym to use will depend on the specific context and what you want to emphasize.